tidesurf.transcript.TranscriptIndex.get_overlapping_transcripts

TranscriptIndex.get_overlapping_transcripts(chromosome: str, strand: Strand, start: int, end: int) → List[Transcript]

Get transcripts that overlap with a given region.

Parameters:

chromosome str

Chromosome of interest.

strand Strand

Strand of interest.

start int

Genomic start position of the region.

end int

Genomic end position of the region.

Returns:

List of transcripts that overlap with the region.

Return type:

List[Transcript]